BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025A03SP1|AL428307
(891 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1560 1683 0.0
>3x_Contig1560
Length = 9209
Score = 1683 bits (839), Expect = 0.0
Identities = 870/891 (97%)
Strand = Plus / Plus
Query: 1 actacgaaacaaatgtccgatgctaactgtaggaaacttgattatgagactgaaattgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5857 actacgaaacaaatgtccgatgctaactgtaggaaacttgattatgagactgaaattgat 5916
Query: 61 atgatttccgaaaacaagcattccgagattgacgatgagagtgagggaaaacttagaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5917 atgatttccgaaaacaagcattccgagattgacgatgagagtgagggaaaacttagaata 5976
Query: 121 tttaacttctttctagccgatgaagaaactagattacttatcactcagtgtccatctttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5977 tttaacttctttctagccgatgaagaaactagattacttatcactcagtgtccatctttc 6036
Query: 181 aagagtattatagaagaratgacatatatsaagcaacgtacgcagtcagaacctcaatgg 240
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 6037 aagagtattatagaagaaatgacatatatcaagcaacgtacgcagtcagaacctcaatgg 6096
Query: 241 aaagctaaaaccaataaaccagaaaaaggattcaagtacgattcatggataagakgcktg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 6097 aaagctaaaaccaataaaccagaaaaaggattcaagtacgattcatggataagatgcttg 6156
Query: 301 aratattatcaatgtgatgckgacgtkaaagctaacggkaactttccgctgccgttctaa 360
| ||||||||||||| |||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 6157 aaatattatcaatgttatgctgacgttaaagctaacggtaactttccgctgccgttctaa 6216
Query: 361 gtstgtgaaarattattaaatatgtgagtgtattttaagtkaagcgatatatgaagtatt 420
|| ||| ||| |||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 6217 gtctgtaaaaaattattaaatatgtgagtctattttaagttaagcgatatatgaagtatt 6276
Query: 421 tcaactttgttgaaaggggccctgtcgctggtactcgtttggtagataatctagcgttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6277 tcaactttgttgaaaggggccctgtcgctggtactcgtttggtagataatctagcgttga 6336
Query: 481 attaagakatkttataaatgtccaaaacccgtgcaccttgattgggtccatataagtgac 540
||||||| || ||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 6337 attaagatattttataaatgtccaaaacccgtacaccttgattggttccatataagtgac 6396
Query: 541 aaatgaggctcttcaatgtcccagtkttagtatgtcattaatcccaagaaacggacccat 600
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 6397 aaatgaggctcttcaatgtcccagttttagtatgtcattaatcccaagaaacggacccat 6456
Query: 601 aagaatttaaacgtgtgaattgattaaaatacttgcgagagtwccttcattatttatggt 660
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6457 aagaatttaaacgtgtgaattgattaaaatacttgcgagagtaccttcattatttatggt 6516
Query: 661 taacaatttgagtgtgagtwatgctatgctctattaactacattaattaagaatgtttct 720
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6517 taacaatttgagtgtgagtaatgctatgctctattaactacattaattaagaatgtttct 6576
Query: 721 tatatctgacgaaacttcagtaattttatcttttcgtcttctgttagctaaccaattttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6577 tatatctgacgaaacttcagtaattttatcttttcgtcttctgttagctaaccaattttt 6636
Query: 781 tatttgggttttagtcaaagtggtgtttttacttatataggccaaatcattttcagcgag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6637 tatttgggttttagtcaaagtggtgtttttacttatataggccaaatcattttcagcgag 6696
Query: 841 gtaagggtttcttctattcatactataccagttctccaggagctgtatatg 891
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6697 gtaagggtttcttctattcatactataccagttctccaggagctgtatatg 6747
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6001
Number of Sequences: 1807
Number of extensions: 6001
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 891
length of database: 10,358,551
effective HSP length: 16
effective length of query: 875
effective length of database: 10,329,639
effective search space: 9038434125
effective search space used: 9038434125
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)